Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CtgfP29268 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtgfP29268 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CtgfP29268 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CtgfP29268 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.39■□□□□ 0.37
CtgfP29268 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.39■□□□□ 0.37
CtgfP29268 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CtgfP29268 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CtgfP29268 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.39■□□□□ 0.37
CtgfP29268 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CtgfP29268 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CtgfP29268 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.38■□□□□ 0.37
CtgfP29268 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.38■□□□□ 0.37
CtgfP29268 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CtgfP29268 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.38■□□□□ 0.37
CtgfP29268 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CtgfP29268 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CtgfP29268 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
CtgfP29268 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CtgfP29268 BC021767-201ENSMUST00000126387 1716 ntBASIC17.36■□□□□ 0.37
CtgfP29268 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CtgfP29268 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CtgfP29268 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CtgfP29268 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.36■□□□□ 0.37
CtgfP29268 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.36■□□□□ 0.37
CtgfP29268 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CtgfP29268 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.36■□□□□ 0.37
CtgfP29268 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CtgfP29268 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CtgfP29268 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.35■□□□□ 0.37
CtgfP29268 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CtgfP29268 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.35■□□□□ 0.37
CtgfP29268 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CtgfP29268 Gm4968-201ENSMUST00000071458 858 ntBASIC17.35■□□□□ 0.37
CtgfP29268 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.35■□□□□ 0.37
CtgfP29268 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.35■□□□□ 0.37
CtgfP29268 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CtgfP29268 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CtgfP29268 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.34■□□□□ 0.37
CtgfP29268 Gm5408-201ENSMUST00000197998 747 ntBASIC17.34■□□□□ 0.37
CtgfP29268 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CtgfP29268 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CtgfP29268 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.33■□□□□ 0.37
CtgfP29268 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms