Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.08■□□□□ 0.81
Mmp3P28862 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp3P28862 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp3P28862 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp3P28862 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp3P28862 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Mmp3P28862 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp3P28862 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Mmp3P28862 Gm10812-201ENSMUST00000099864 546 ntBASIC20.07■□□□□ 0.8
Mmp3P28862 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp3P28862 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp3P28862 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.06■□□□□ 0.8
Mmp3P28862 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.06■□□□□ 0.8
Mmp3P28862 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Mmp3P28862 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Mmp3P28862 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp3P28862 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Mmp3P28862 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.05■□□□□ 0.8
Mmp3P28862 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp3P28862 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.05■□□□□ 0.8
Mmp3P28862 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp3P28862 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.04■□□□□ 0.8
Mmp3P28862 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp3P28862 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.04■□□□□ 0.8
Mmp3P28862 Gm10252-201ENSMUST00000209541 832 ntBASIC20.04■□□□□ 0.8
Mmp3P28862 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.04■□□□□ 0.8
Mmp3P28862 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Mmp3P28862 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Mmp3P28862 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp3P28862 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp3P28862 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Gm11249-201ENSMUST00000117071 859 ntBASIC20.03■□□□□ 0.8
Mmp3P28862 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.03■□□□□ 0.8
Mmp3P28862 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.03■□□□□ 0.8
Mmp3P28862 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Mmp3P28862 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp3P28862 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp3P28862 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.02■□□□□ 0.8
Mmp3P28862 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.02■□□□□ 0.8
Mmp3P28862 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Gm2399-201ENSMUST00000104944 225 ntBASIC20.02■□□□□ 0.8
Mmp3P28862 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Gm5643-201ENSMUST00000117081 966 ntBASIC20.02■□□□□ 0.8
Mmp3P28862 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
Mmp3P28862 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp3P28862 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Mmp3P28862 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp3P28862 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp3P28862 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp3P28862 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp3P28862 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Mmp3P28862 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mmp3P28862 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp3P28862 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20■□□□□ 0.79
Mmp3P28862 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mmp3P28862 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Mmp3P28862 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp3P28862 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms