Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf8P23611 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Irf8P23611 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Irf8P23611 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Irf8P23611 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.2■□□□□ 0.82
Irf8P23611 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.2■□□□□ 0.82
Irf8P23611 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf8P23611 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Irf8P23611 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf8P23611 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Irf8P23611 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.19■□□□□ 0.82
Irf8P23611 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf8P23611 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf8P23611 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.18■□□□□ 0.82
Irf8P23611 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Irf8P23611 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Irf8P23611 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf8P23611 Golph3-205ENSMUST00000228671 2842 ntBASIC20.17■□□□□ 0.82
Irf8P23611 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.17■□□□□ 0.82
Irf8P23611 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Irf8P23611 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.17■□□□□ 0.82
Irf8P23611 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.17■□□□□ 0.82
Irf8P23611 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Irf8P23611 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.17■□□□□ 0.82
Irf8P23611 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.16■□□□□ 0.82
Irf8P23611 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Irf8P23611 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Gm7290-201ENSMUST00000104990 617 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Gm12918-201ENSMUST00000120234 636 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Gm15710-201ENSMUST00000121821 636 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Irf8P23611 Gm5075-201ENSMUST00000196916 622 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.16■□□□□ 0.82
Irf8P23611 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.16■□□□□ 0.82
Irf8P23611 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Irf8P23611 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Irf8P23611 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.15■□□□□ 0.82
Irf8P23611 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Irf8P23611 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.15■□□□□ 0.82
Irf8P23611 Gm37179-201ENSMUST00000194862 823 ntBASIC20.15■□□□□ 0.82
Irf8P23611 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Irf8P23611 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.15■□□□□ 0.82
Irf8P23611 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms