Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga1P17095 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga1P17095 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga1P17095 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmga1P17095 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga1P17095 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmga1P17095 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Hmga1P17095 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hmga1P17095 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmga1P17095 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.17■□□□□ 0.66
Hmga1P17095 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.17■□□□□ 0.66
Hmga1P17095 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmga1P17095 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hmga1P17095 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmga1P17095 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.16■□□□□ 0.66
Hmga1P17095 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmga1P17095 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hmga1P17095 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.15■□□□□ 0.66
Hmga1P17095 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmga1P17095 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.15■□□□□ 0.66
Hmga1P17095 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmga1P17095 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hmga1P17095 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmga1P17095 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.13■□□□□ 0.65
Hmga1P17095 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Gm11249-201ENSMUST00000117071 859 ntBASIC19.13■□□□□ 0.65
Hmga1P17095 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmga1P17095 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.12■□□□□ 0.65
Hmga1P17095 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.12■□□□□ 0.65
Hmga1P17095 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.12■□□□□ 0.65
Hmga1P17095 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.12■□□□□ 0.65
Hmga1P17095 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.12■□□□□ 0.65
Hmga1P17095 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hmga1P17095 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hmga1P17095 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Hmga1P17095 Gm5643-201ENSMUST00000117081 966 ntBASIC19.11■□□□□ 0.65
Hmga1P17095 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.11■□□□□ 0.65
Hmga1P17095 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.11■□□□□ 0.65
Hmga1P17095 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Hmga1P17095 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hmga1P17095 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hmga1P17095 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms