Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim30aP15533 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim30aP15533 AA386476-201ENSMUST00000098781 1665 ntBASIC20.57■□□□□ 0.88
Trim30aP15533 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim30aP15533 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Trim30aP15533 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim30aP15533 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.56■□□□□ 0.88
Trim30aP15533 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim30aP15533 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim30aP15533 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.55■□□□□ 0.88
Trim30aP15533 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.55■□□□□ 0.88
Trim30aP15533 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim30aP15533 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.55■□□□□ 0.88
Trim30aP15533 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.55■□□□□ 0.88
Trim30aP15533 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim30aP15533 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trim30aP15533 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim30aP15533 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim30aP15533 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim30aP15533 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim30aP15533 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim30aP15533 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim30aP15533 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30aP15533 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30aP15533 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30aP15533 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trim30aP15533 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30aP15533 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30aP15533 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30aP15533 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30aP15533 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30aP15533 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.52■□□□□ 0.87
Trim30aP15533 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim30aP15533 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim30aP15533 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim30aP15533 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim30aP15533 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30aP15533 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim30aP15533 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Trim30aP15533 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim30aP15533 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30aP15533 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms