Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.64■□□□□ 0.73
Cd44P15379 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cd44P15379 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.64■□□□□ 0.73
Cd44P15379 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd44P15379 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Gm27801-201ENSMUST00000184174 223 ntBASIC19.63■□□□□ 0.73
Cd44P15379 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cd44P15379 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd44P15379 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Cd44P15379 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cd44P15379 Gm13241-201ENSMUST00000094493 780 ntBASIC19.62■□□□□ 0.73
Cd44P15379 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cd44P15379 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd44P15379 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cd44P15379 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd44P15379 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cd44P15379 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Cd44P15379 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Cd44P15379 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd44P15379 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd44P15379 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd44P15379 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.6■□□□□ 0.73
Cd44P15379 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cd44P15379 Gm8493-201ENSMUST00000196881 489 ntBASIC19.6■□□□□ 0.73
Cd44P15379 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.6■□□□□ 0.73
Cd44P15379 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Cd44P15379 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.6■□□□□ 0.73
Cd44P15379 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd44P15379 Fst-202ENSMUST00000223640 2612 ntBASIC19.59■□□□□ 0.73
Cd44P15379 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cd44P15379 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cd44P15379 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd44P15379 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Cd44P15379 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.58■□□□□ 0.73
Cd44P15379 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd44P15379 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cd44P15379 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.58■□□□□ 0.72
Cd44P15379 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cd44P15379 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Cd44P15379 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd44P15379 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cd44P15379 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd44P15379 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.57■□□□□ 0.72
Cd44P15379 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd44P15379 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.57■□□□□ 0.72
Cd44P15379 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd44P15379 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cd44P15379 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cd44P15379 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.57■□□□□ 0.72
Cd44P15379 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cd44P15379 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cd44P15379 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Cd44P15379 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd44P15379 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms