Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.66■□□□□ 0.42
Msx1P13297 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Msx1P13297 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
Msx1P13297 Gm6420-201ENSMUST00000193885 723 ntBASIC17.65■□□□□ 0.42
Msx1P13297 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Msx1P13297 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Msx1P13297 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Msx1P13297 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Msx1P13297 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Msx1P13297 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msx1P13297 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.64■□□□□ 0.41
Msx1P13297 Mir6982-201ENSMUST00000184354 68 ntBASIC17.64■□□□□ 0.41
Msx1P13297 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msx1P13297 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.64■□□□□ 0.41
Msx1P13297 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Msx1P13297 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msx1P13297 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.63■□□□□ 0.41
Msx1P13297 Iqck-206ENSMUST00000208658 2891 ntBASIC17.63■□□□□ 0.41
Msx1P13297 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Msx1P13297 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.63■□□□□ 0.41
Msx1P13297 Gm38205-201ENSMUST00000192243 258 ntBASIC17.63■□□□□ 0.41
Msx1P13297 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.63■□□□□ 0.41
Msx1P13297 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Msx1P13297 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msx1P13297 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.62■□□□□ 0.41
Msx1P13297 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Msx1P13297 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.62■□□□□ 0.41
Msx1P13297 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.62■□□□□ 0.41
Msx1P13297 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.62■□□□□ 0.41
Msx1P13297 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.62■□□□□ 0.41
Msx1P13297 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.62■□□□□ 0.41
Msx1P13297 Gm7977-201ENSMUST00000193787 748 ntBASIC17.62■□□□□ 0.41
Msx1P13297 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.62■□□□□ 0.41
Msx1P13297 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.62■□□□□ 0.41
Msx1P13297 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Msx1P13297 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msx1P13297 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Msx1P13297 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Trmt13-210ENSMUST00000198454 880 ntBASIC17.61■□□□□ 0.41
Msx1P13297 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.61■□□□□ 0.41
Msx1P13297 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Msx1P13297 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msx1P13297 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.61■□□□□ 0.41
Msx1P13297 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.6■□□□□ 0.41
Msx1P13297 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Msx1P13297 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Msx1P13297 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.6■□□□□ 0.41
Msx1P13297 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.6■□□□□ 0.41
Msx1P13297 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.6■□□□□ 0.41
Msx1P13297 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msx1P13297 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.6■□□□□ 0.41
Msx1P13297 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Msx1P13297 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms