Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a2P08122 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.56■□□□□ 0.4
Col4a2P08122 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col4a2P08122 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a2P08122 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a2P08122 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a2P08122 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Col4a2P08122 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col4a2P08122 Gm15378-201ENSMUST00000121894 207 ntBASIC17.55■□□□□ 0.4
Col4a2P08122 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a2P08122 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col4a2P08122 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a2P08122 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.54■□□□□ 0.4
Col4a2P08122 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Col4a2P08122 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a2P08122 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Col4a2P08122 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Col4a2P08122 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a2P08122 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.53■□□□□ 0.4
Col4a2P08122 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Col4a2P08122 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a2P08122 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a2P08122 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a2P08122 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a2P08122 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.52■□□□□ 0.4
Col4a2P08122 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Col4a2P08122 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.52■□□□□ 0.4
Col4a2P08122 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.52■□□□□ 0.4
Col4a2P08122 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.52■□□□□ 0.4
Col4a2P08122 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a2P08122 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a2P08122 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.52■□□□□ 0.4
Col4a2P08122 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Col4a2P08122 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Col4a2P08122 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Col4a2P08122 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.52■□□□□ 0.39
Col4a2P08122 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.52■□□□□ 0.39
Col4a2P08122 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a2P08122 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a2P08122 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a2P08122 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.51■□□□□ 0.39
Col4a2P08122 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a2P08122 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.5■□□□□ 0.39
Col4a2P08122 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Col4a2P08122 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a2P08122 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms