Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TnfP06804 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TnfP06804 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TnfP06804 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.88■□□□□ 0.77
TnfP06804 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TnfP06804 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TnfP06804 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.88■□□□□ 0.77
TnfP06804 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
TnfP06804 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TnfP06804 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TnfP06804 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TnfP06804 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TnfP06804 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TnfP06804 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TnfP06804 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TnfP06804 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TnfP06804 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.85■□□□□ 0.77
TnfP06804 Gm37856-201ENSMUST00000191634 999 ntBASIC19.85■□□□□ 0.77
TnfP06804 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.85■□□□□ 0.77
TnfP06804 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.85■□□□□ 0.77
TnfP06804 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.85■□□□□ 0.77
TnfP06804 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.85■□□□□ 0.77
TnfP06804 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TnfP06804 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TnfP06804 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TnfP06804 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
TnfP06804 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TnfP06804 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TnfP06804 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TnfP06804 Gm12896-201ENSMUST00000118430 226 ntBASIC19.82■□□□□ 0.76
TnfP06804 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TnfP06804 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.82■□□□□ 0.76
TnfP06804 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TnfP06804 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TnfP06804 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TnfP06804 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TnfP06804 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TnfP06804 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TnfP06804 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TnfP06804 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.81■□□□□ 0.76
TnfP06804 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TnfP06804 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TnfP06804 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.81■□□□□ 0.76
TnfP06804 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TnfP06804 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Trmt13-210ENSMUST00000198454 880 ntBASIC19.8■□□□□ 0.76
TnfP06804 Gm44549-201ENSMUST00000208351 577 ntBASIC19.8■□□□□ 0.76
TnfP06804 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TnfP06804 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.79■□□□□ 0.76
TnfP06804 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TnfP06804 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.79■□□□□ 0.76
TnfP06804 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 Gm22240-201ENSMUST00000175225 82 ntBASIC19.79■□□□□ 0.76
TnfP06804 Gm8520-201ENSMUST00000186517 868 ntBASIC19.79■□□□□ 0.76
TnfP06804 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.79■□□□□ 0.76
TnfP06804 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TnfP06804 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms