Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.66□□□□□ -0.22
P06328 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Gm27801-201ENSMUST00000184174 223 ntBASIC13.66□□□□□ -0.22
P06328 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.66□□□□□ -0.22
P06328 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.66□□□□□ -0.22
P06328 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.66□□□□□ -0.22
P06328 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.66□□□□□ -0.22
P06328 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.66□□□□□ -0.22
P06328 Grk6-206ENSMUST00000224995 2971 ntBASIC13.66□□□□□ -0.22
P06328 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P06328 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P06328 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.65□□□□□ -0.22
P06328 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
P06328 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.65□□□□□ -0.22
P06328 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P06328 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.65□□□□□ -0.22
P06328 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P06328 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P06328 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.65□□□□□ -0.22
P06328 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P06328 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
P06328 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
P06328 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
P06328 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.64□□□□□ -0.23
P06328 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
P06328 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.64□□□□□ -0.23
P06328 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P06328 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
P06328 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
P06328 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.64□□□□□ -0.23
P06328 Gm8493-201ENSMUST00000196881 489 ntBASIC13.64□□□□□ -0.23
P06328 Gm43173-201ENSMUST00000202246 593 ntBASIC13.64□□□□□ -0.23
P06328 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P06328 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
P06328 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
P06328 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.62□□□□□ -0.23
P06328 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.62□□□□□ -0.23
P06328 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06328 Rarb-207ENSMUST00000225921 2756 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms