Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
PdgfrbP05622 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.87■□□□□ 0.61
PdgfrbP05622 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Gm42642-201ENSMUST00000200683 355 ntBASIC18.87■□□□□ 0.61
PdgfrbP05622 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PdgfrbP05622 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PdgfrbP05622 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PdgfrbP05622 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PdgfrbP05622 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
PdgfrbP05622 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PdgfrbP05622 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Gm10033-202ENSMUST00000211874 928 ntBASIC18.86■□□□□ 0.61
PdgfrbP05622 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PdgfrbP05622 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PdgfrbP05622 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.85■□□□□ 0.61
PdgfrbP05622 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PdgfrbP05622 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.85■□□□□ 0.61
PdgfrbP05622 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Gm18284-201ENSMUST00000172604 624 ntBASIC18.85■□□□□ 0.61
PdgfrbP05622 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PdgfrbP05622 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PdgfrbP05622 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.84■□□□□ 0.61
PdgfrbP05622 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Gm13534-201ENSMUST00000121169 513 ntBASIC18.84■□□□□ 0.61
PdgfrbP05622 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.84■□□□□ 0.61
PdgfrbP05622 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PdgfrbP05622 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PdgfrbP05622 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfrbP05622 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.83■□□□□ 0.61
PdgfrbP05622 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PdgfrbP05622 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfrbP05622 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PdgfrbP05622 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfrbP05622 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfrbP05622 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PdgfrbP05622 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.83■□□□□ 0.61
PdgfrbP05622 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.83■□□□□ 0.6
PdgfrbP05622 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.83■□□□□ 0.6
PdgfrbP05622 Gm18671-201ENSMUST00000214826 683 ntBASIC18.83■□□□□ 0.6
PdgfrbP05622 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfrbP05622 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.83■□□□□ 0.6
PdgfrbP05622 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfrbP05622 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfrbP05622 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfrbP05622 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PdgfrbP05622 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PdgfrbP05622 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.82■□□□□ 0.6
PdgfrbP05622 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.82■□□□□ 0.6
PdgfrbP05622 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PdgfrbP05622 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PdgfrbP05622 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PdgfrbP05622 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.82■□□□□ 0.6
PdgfrbP05622 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.82■□□□□ 0.6
PdgfrbP05622 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PdgfrbP05622 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms