Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PrnpP04925 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PrnpP04925 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PrnpP04925 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PrnpP04925 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PrnpP04925 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PrnpP04925 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PrnpP04925 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PrnpP04925 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.44■□□□□ 0.7
PrnpP04925 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.44■□□□□ 0.7
PrnpP04925 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PrnpP04925 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PrnpP04925 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PrnpP04925 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PrnpP04925 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
PrnpP04925 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.43■□□□□ 0.7
PrnpP04925 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.43■□□□□ 0.7
PrnpP04925 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.43■□□□□ 0.7
PrnpP04925 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PrnpP04925 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.43■□□□□ 0.7
PrnpP04925 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.43■□□□□ 0.7
PrnpP04925 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PrnpP04925 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.42■□□□□ 0.7
PrnpP04925 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.42■□□□□ 0.7
PrnpP04925 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.42■□□□□ 0.7
PrnpP04925 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PrnpP04925 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.42■□□□□ 0.7
PrnpP04925 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PrnpP04925 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PrnpP04925 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
PrnpP04925 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
PrnpP04925 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.4■□□□□ 0.7
PrnpP04925 Gm11927-201ENSMUST00000118472 759 ntBASIC19.4■□□□□ 0.7
PrnpP04925 Gm37055-201ENSMUST00000191866 133 ntBASIC19.4■□□□□ 0.7
PrnpP04925 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PrnpP04925 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PrnpP04925 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PrnpP04925 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PrnpP04925 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.39■□□□□ 0.69
PrnpP04925 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PrnpP04925 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PrnpP04925 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PrnpP04925 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PrnpP04925 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.38■□□□□ 0.69
PrnpP04925 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.38■□□□□ 0.69
PrnpP04925 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.38■□□□□ 0.69
PrnpP04925 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.38■□□□□ 0.69
PrnpP04925 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PrnpP04925 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PrnpP04925 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PrnpP04925 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms