Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.63■□□□□ 0.09
Cd74P04441 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.63■□□□□ 0.09
Cd74P04441 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cd74P04441 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.63■□□□□ 0.09
Cd74P04441 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cd74P04441 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cd74P04441 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd74P04441 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.62■□□□□ 0.09
Cd74P04441 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cd74P04441 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cd74P04441 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Cd74P04441 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Gm29257-201ENSMUST00000186115 639 ntBASIC15.61■□□□□ 0.09
Cd74P04441 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cd74P04441 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cd74P04441 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cd74P04441 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cd74P04441 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.6■□□□□ 0.09
Cd74P04441 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cd74P04441 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.59■□□□□ 0.09
Cd74P04441 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.59■□□□□ 0.09
Cd74P04441 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.59■□□□□ 0.09
Cd74P04441 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.59■□□□□ 0.09
Cd74P04441 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cd74P04441 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.58■□□□□ 0.09
Cd74P04441 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cd74P04441 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
Cd74P04441 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cd74P04441 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cd74P04441 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Cd74P04441 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.58■□□□□ 0.08
Cd74P04441 Gm37179-201ENSMUST00000194862 823 ntBASIC15.58■□□□□ 0.08
Cd74P04441 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Cd74P04441 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cd74P04441 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cd74P04441 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms