Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col4a1P02463 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col4a1P02463 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col4a1P02463 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col4a1P02463 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Col4a1P02463 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col4a1P02463 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Col4a1P02463 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.25■■□□□ 1.31
Col4a1P02463 Gm22325-201ENSMUST00000158904 308 ntBASIC23.25■■□□□ 1.31
Col4a1P02463 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
Col4a1P02463 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.24■■□□□ 1.31
Col4a1P02463 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.24■■□□□ 1.31
Col4a1P02463 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.24■■□□□ 1.31
Col4a1P02463 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col4a1P02463 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.23■■□□□ 1.31
Col4a1P02463 Gm13836-201ENSMUST00000121159 501 ntBASIC23.23■■□□□ 1.31
Col4a1P02463 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.23■■□□□ 1.31
Col4a1P02463 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Col4a1P02463 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Col4a1P02463 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.23■■□□□ 1.31
Col4a1P02463 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col4a1P02463 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Col4a1P02463 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col4a1P02463 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col4a1P02463 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col4a1P02463 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.22■■□□□ 1.31
Col4a1P02463 Gm20472-201ENSMUST00000174403 1240 ntBASIC23.22■■□□□ 1.31
Col4a1P02463 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.22■■□□□ 1.31
Col4a1P02463 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.21■■□□□ 1.31
Col4a1P02463 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.21■■□□□ 1.31
Col4a1P02463 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.21■■□□□ 1.31
Col4a1P02463 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Golph3-202ENSMUST00000226517 2359 ntBASIC23.21■■□□□ 1.31
Col4a1P02463 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col4a1P02463 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col4a1P02463 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.2■■□□□ 1.3
Col4a1P02463 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.2■■□□□ 1.3
Col4a1P02463 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col4a1P02463 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col4a1P02463 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col4a1P02463 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col4a1P02463 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.2■■□□□ 1.3
Col4a1P02463 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.19■■□□□ 1.3
Col4a1P02463 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.19■■□□□ 1.3
Col4a1P02463 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Col4a1P02463 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.19■■□□□ 1.3
Col4a1P02463 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col4a1P02463 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.18■■□□□ 1.3
Col4a1P02463 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col4a1P02463 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms