Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.63■□□□□ 0.25
Hdac3O88895 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hdac3O88895 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hdac3O88895 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Hdac3O88895 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.62■□□□□ 0.25
Hdac3O88895 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.62■□□□□ 0.25
Hdac3O88895 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hdac3O88895 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Hdac3O88895 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac3O88895 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.61■□□□□ 0.25
Hdac3O88895 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.61■□□□□ 0.25
Hdac3O88895 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac3O88895 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.61■□□□□ 0.25
Hdac3O88895 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Hdac3O88895 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hdac3O88895 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hdac3O88895 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hdac3O88895 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.61■□□□□ 0.25
Hdac3O88895 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hdac3O88895 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Hdac3O88895 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.6■□□□□ 0.25
Hdac3O88895 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.6■□□□□ 0.25
Hdac3O88895 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.6■□□□□ 0.25
Hdac3O88895 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Hdac3O88895 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hdac3O88895 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hdac3O88895 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Hdac3O88895 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.59■□□□□ 0.25
Hdac3O88895 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hdac3O88895 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hdac3O88895 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hdac3O88895 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hdac3O88895 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms