Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.54■□□□□ 0.24
CcnkO88874 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CcnkO88874 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.54■□□□□ 0.24
CcnkO88874 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CcnkO88874 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CcnkO88874 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CcnkO88874 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CcnkO88874 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
CcnkO88874 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CcnkO88874 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.53■□□□□ 0.24
CcnkO88874 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.53■□□□□ 0.24
CcnkO88874 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.53■□□□□ 0.24
CcnkO88874 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CcnkO88874 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CcnkO88874 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CcnkO88874 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CcnkO88874 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.52■□□□□ 0.24
CcnkO88874 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CcnkO88874 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CcnkO88874 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CcnkO88874 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 AA386476-201ENSMUST00000098781 1665 ntBASIC16.52■□□□□ 0.23
CcnkO88874 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CcnkO88874 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CcnkO88874 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CcnkO88874 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CcnkO88874 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CcnkO88874 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Gm21956-201ENSMUST00000179946 522 ntBASIC16.51■□□□□ 0.23
CcnkO88874 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.51■□□□□ 0.23
CcnkO88874 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.51■□□□□ 0.23
CcnkO88874 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CcnkO88874 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.5■□□□□ 0.23
CcnkO88874 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.5■□□□□ 0.23
CcnkO88874 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CcnkO88874 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CcnkO88874 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CcnkO88874 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CcnkO88874 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CcnkO88874 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CcnkO88874 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.49■□□□□ 0.23
CcnkO88874 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Gm43137-201ENSMUST00000198052 594 ntBASIC16.49■□□□□ 0.23
CcnkO88874 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CcnkO88874 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.49■□□□□ 0.23
CcnkO88874 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CcnkO88874 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CcnkO88874 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CcnkO88874 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CcnkO88874 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CcnkO88874 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CcnkO88874 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms