Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf17O88472 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf17O88472 Flg-201ENSMUST00000050758 1488 ntBASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 AA414768-201ENSMUST00000121924 1257 ntBASIC17.39■□□□□ 0.37
Tnfrsf17O88472 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf17O88472 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Odf3b-204ENSMUST00000227834 930 ntBASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tnfrsf17O88472 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.37■□□□□ 0.37
Tnfrsf17O88472 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf17O88472 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Gm3375-201ENSMUST00000203929 796 ntBASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf17O88472 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf17O88472 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tnfrsf17O88472 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf17O88472 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf17O88472 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms