Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.27■□□□□ 0.52
Cdh16O88338 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh16O88338 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdh16O88338 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh16O88338 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.26■□□□□ 0.51
Cdh16O88338 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cdh16O88338 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdh16O88338 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.26■□□□□ 0.51
Cdh16O88338 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cdh16O88338 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.26■□□□□ 0.51
Cdh16O88338 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh16O88338 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.25■□□□□ 0.51
Cdh16O88338 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdh16O88338 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.25■□□□□ 0.51
Cdh16O88338 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh16O88338 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdh16O88338 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh16O88338 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.24■□□□□ 0.51
Cdh16O88338 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh16O88338 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdh16O88338 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdh16O88338 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh16O88338 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.23■□□□□ 0.51
Cdh16O88338 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cdh16O88338 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdh16O88338 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.23■□□□□ 0.51
Cdh16O88338 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
Cdh16O88338 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cdh16O88338 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh16O88338 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.22■□□□□ 0.51
Cdh16O88338 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
Cdh16O88338 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh16O88338 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.22■□□□□ 0.51
Cdh16O88338 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh16O88338 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms