Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ubr1O70481 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr1O70481 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr1O70481 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.54■■□□□ 1.52
Ubr1O70481 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr1O70481 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr1O70481 AL672049.1-201ENSMUST00000197943 91 ntBASIC24.54■■□□□ 1.52
Ubr1O70481 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ubr1O70481 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr1O70481 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Ubr1O70481 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.53■■□□□ 1.52
Ubr1O70481 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Ubr1O70481 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr1O70481 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC24.52■■□□□ 1.52
Ubr1O70481 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Ubr1O70481 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC24.52■■□□□ 1.52
Ubr1O70481 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr1O70481 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr1O70481 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ubr1O70481 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr1O70481 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr1O70481 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr1O70481 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ubr1O70481 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Ubr1O70481 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Ubr1O70481 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ubr1O70481 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC24.49■■□□□ 1.51
Ubr1O70481 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC24.49■■□□□ 1.51
Ubr1O70481 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Flg-201ENSMUST00000050758 1488 ntBASIC24.49■■□□□ 1.51
Ubr1O70481 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC24.49■■□□□ 1.51
Ubr1O70481 Gm7977-201ENSMUST00000193787 748 ntBASIC24.49■■□□□ 1.51
Ubr1O70481 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ubr1O70481 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr1O70481 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.48■■□□□ 1.51
Ubr1O70481 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr1O70481 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC24.48■■□□□ 1.51
Ubr1O70481 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr1O70481 Mtag2-201ENSMUST00000058665 714 ntBASIC24.48■■□□□ 1.51
Ubr1O70481 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Ubr1O70481 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr1O70481 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ubr1O70481 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr1O70481 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC24.47■■□□□ 1.51
Ubr1O70481 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Ubr1O70481 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr1O70481 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC24.47■■□□□ 1.51
Ubr1O70481 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr1O70481 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ubr1O70481 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC24.47■■□□□ 1.51
Ubr1O70481 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
Ubr1O70481 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
Ubr1O70481 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
Ubr1O70481 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Gm20472-201ENSMUST00000174403 1240 ntBASIC24.46■■□□□ 1.51
Ubr1O70481 Gm37805-201ENSMUST00000192612 1094 ntBASIC24.46■■□□□ 1.51
Ubr1O70481 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ubr1O70481 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC24.45■■□□□ 1.51
Ubr1O70481 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Ubr1O70481 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ubr1O70481 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms