Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pja1O55176 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Pja1O55176 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.73■□□□□ 0.75
Pja1O55176 Mir7075-201ENSMUST00000184187 82 ntBASIC19.73■□□□□ 0.75
Pja1O55176 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.73■□□□□ 0.75
Pja1O55176 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pja1O55176 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pja1O55176 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.72■□□□□ 0.75
Pja1O55176 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pja1O55176 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pja1O55176 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pja1O55176 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.71■□□□□ 0.75
Pja1O55176 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.71■□□□□ 0.75
Pja1O55176 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pja1O55176 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.71■□□□□ 0.75
Pja1O55176 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.71■□□□□ 0.75
Pja1O55176 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pja1O55176 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pja1O55176 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.71■□□□□ 0.75
Pja1O55176 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.71■□□□□ 0.75
Pja1O55176 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pja1O55176 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.7■□□□□ 0.74
Pja1O55176 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.7■□□□□ 0.74
Pja1O55176 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Gm13241-201ENSMUST00000094493 780 ntBASIC19.7■□□□□ 0.74
Pja1O55176 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pja1O55176 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.7■□□□□ 0.74
Pja1O55176 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.69■□□□□ 0.74
Pja1O55176 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.69■□□□□ 0.74
Pja1O55176 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.69■□□□□ 0.74
Pja1O55176 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.69■□□□□ 0.74
Pja1O55176 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.69■□□□□ 0.74
Pja1O55176 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pja1O55176 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.68■□□□□ 0.74
Pja1O55176 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pja1O55176 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pja1O55176 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pja1O55176 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
Pja1O55176 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.67■□□□□ 0.74
Pja1O55176 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pja1O55176 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pja1O55176 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms