Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rpl35aO55142 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rpl35aO55142 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl35aO55142 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpl35aO55142 Gm37179-201ENSMUST00000194862 823 ntBASIC13.89□□□□□ -0.19
Rpl35aO55142 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl35aO55142 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.89□□□□□ -0.19
Rpl35aO55142 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl35aO55142 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl35aO55142 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rpl35aO55142 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.88□□□□□ -0.19
Rpl35aO55142 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
Rpl35aO55142 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.88□□□□□ -0.19
Rpl35aO55142 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Rpl35aO55142 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.88□□□□□ -0.19
Rpl35aO55142 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rpl35aO55142 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl35aO55142 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.87□□□□□ -0.19
Rpl35aO55142 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Rpl35aO55142 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.87□□□□□ -0.19
Rpl35aO55142 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl35aO55142 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rpl35aO55142 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpl35aO55142 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Gm13146-201ENSMUST00000118508 780 ntBASIC13.86□□□□□ -0.19
Rpl35aO55142 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Nespas-201ENSMUST00000143738 1083 ntBASIC13.86□□□□□ -0.19
Rpl35aO55142 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.86□□□□□ -0.19
Rpl35aO55142 Gm6420-201ENSMUST00000193885 723 ntBASIC13.86□□□□□ -0.19
Rpl35aO55142 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.86□□□□□ -0.19
Rpl35aO55142 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rpl35aO55142 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.86□□□□□ -0.19
Rpl35aO55142 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl35aO55142 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rpl35aO55142 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.85□□□□□ -0.19
Rpl35aO55142 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.85□□□□□ -0.19
Rpl35aO55142 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl35aO55142 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rpl35aO55142 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rpl35aO55142 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.84□□□□□ -0.19
Rpl35aO55142 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rpl35aO55142 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl35aO55142 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl35aO55142 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl35aO55142 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rpl35aO55142 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpl35aO55142 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpl35aO55142 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms