Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Prom1O54990 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prom1O54990 Gm22325-201ENSMUST00000158904 308 ntBASIC20.69■□□□□ 0.9
Prom1O54990 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.69■□□□□ 0.9
Prom1O54990 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Prom1O54990 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Prom1O54990 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prom1O54990 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Prom1O54990 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prom1O54990 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Prom1O54990 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.68■□□□□ 0.9
Prom1O54990 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prom1O54990 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prom1O54990 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Prom1O54990 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Prom1O54990 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.67■□□□□ 0.9
Prom1O54990 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.67■□□□□ 0.9
Prom1O54990 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prom1O54990 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.67■□□□□ 0.9
Prom1O54990 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.67■□□□□ 0.9
Prom1O54990 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prom1O54990 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prom1O54990 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prom1O54990 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prom1O54990 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Prom1O54990 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Gm15565-201ENSMUST00000118890 427 ntBASIC20.66■□□□□ 0.9
Prom1O54990 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.66■□□□□ 0.9
Prom1O54990 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Prom1O54990 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.66■□□□□ 0.9
Prom1O54990 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Prom1O54990 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Prom1O54990 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prom1O54990 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Prom1O54990 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.65■□□□□ 0.9
Prom1O54990 Gm18666-201ENSMUST00000190039 958 ntBASIC20.65■□□□□ 0.9
Prom1O54990 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.65■□□□□ 0.9
Prom1O54990 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.65■□□□□ 0.9
Prom1O54990 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Prom1O54990 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prom1O54990 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prom1O54990 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prom1O54990 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prom1O54990 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.64■□□□□ 0.89
Prom1O54990 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prom1O54990 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Prom1O54990 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.63■□□□□ 0.89
Prom1O54990 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Prom1O54990 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prom1O54990 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Prom1O54990 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.62■□□□□ 0.89
Prom1O54990 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.62■□□□□ 0.89
Prom1O54990 Gm7977-201ENSMUST00000193787 748 ntBASIC20.62■□□□□ 0.89
Prom1O54990 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.62■□□□□ 0.89
Prom1O54990 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prom1O54990 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Prom1O54990 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.61■□□□□ 0.89
Prom1O54990 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Prom1O54990 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.61■□□□□ 0.89
Prom1O54990 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.61■□□□□ 0.89
Prom1O54990 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prom1O54990 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Prom1O54990 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms