Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn5O54942 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn5O54942 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn5O54942 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.43■□□□□ 0.7
Cldn5O54942 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.43■□□□□ 0.7
Cldn5O54942 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.43■□□□□ 0.7
Cldn5O54942 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Cldn5O54942 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cldn5O54942 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cldn5O54942 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.42■□□□□ 0.7
Cldn5O54942 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.42■□□□□ 0.7
Cldn5O54942 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cldn5O54942 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cldn5O54942 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn5O54942 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Gm12527-201ENSMUST00000117967 564 ntBASIC19.41■□□□□ 0.7
Cldn5O54942 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.41■□□□□ 0.7
Cldn5O54942 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.41■□□□□ 0.7
Cldn5O54942 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.41■□□□□ 0.7
Cldn5O54942 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn5O54942 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn5O54942 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn5O54942 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn5O54942 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cldn5O54942 Gm10653-202ENSMUST00000139570 835 ntBASIC19.4■□□□□ 0.7
Cldn5O54942 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cldn5O54942 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cldn5O54942 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cldn5O54942 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn5O54942 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn5O54942 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cldn5O54942 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cldn5O54942 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn5O54942 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn5O54942 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.39■□□□□ 0.69
Cldn5O54942 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Cldn5O54942 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Rab3c-203ENSMUST00000224180 967 ntBASIC19.39■□□□□ 0.69
Cldn5O54942 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.39■□□□□ 0.69
Cldn5O54942 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn5O54942 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cldn5O54942 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.38■□□□□ 0.69
Cldn5O54942 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cldn5O54942 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.38■□□□□ 0.69
Cldn5O54942 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn5O54942 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn5O54942 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cldn5O54942 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cldn5O54942 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn5O54942 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn5O54942 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldn5O54942 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms