Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Stx1aO35526 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Gm7860-201ENSMUST00000121190 879 ntBASIC20.97■□□□□ 0.95
Stx1aO35526 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.97■□□□□ 0.95
Stx1aO35526 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stx1aO35526 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Stx1aO35526 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Stx1aO35526 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.96■□□□□ 0.95
Stx1aO35526 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Stx1aO35526 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stx1aO35526 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Stx1aO35526 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stx1aO35526 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.95■□□□□ 0.94
Stx1aO35526 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Stx1aO35526 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Stx1aO35526 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Stx1aO35526 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stx1aO35526 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Stx1aO35526 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.94■□□□□ 0.94
Stx1aO35526 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Stx1aO35526 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Stx1aO35526 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.93■□□□□ 0.94
Stx1aO35526 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Stx1aO35526 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Stx1aO35526 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
Stx1aO35526 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.93■□□□□ 0.94
Stx1aO35526 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stx1aO35526 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Stx1aO35526 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.93■□□□□ 0.94
Stx1aO35526 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Stx1aO35526 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Stx1aO35526 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Stx1aO35526 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Stx1aO35526 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stx1aO35526 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.91■□□□□ 0.94
Stx1aO35526 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Stx1aO35526 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.91■□□□□ 0.94
Stx1aO35526 Gm43137-201ENSMUST00000198052 594 ntBASIC20.91■□□□□ 0.94
Stx1aO35526 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stx1aO35526 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms