Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Gm15546-201ENSMUST00000122095 826 ntBASIC17■□□□□ 0.31
Shisa8J3QNX5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
Shisa8J3QNX5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Shisa8J3QNX5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa8J3QNX5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shisa8J3QNX5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa8J3QNX5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa8J3QNX5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa8J3QNX5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shisa8J3QNX5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Shisa8J3QNX5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Shisa8J3QNX5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.95■□□□□ 0.3
Shisa8J3QNX5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa8J3QNX5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa8J3QNX5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Fst-202ENSMUST00000223640 2612 ntBASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa8J3QNX5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms