Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Gm13534-201ENSMUST00000121169 513 ntBASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav13d-3J3QMG8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Gm5874-201ENSMUST00000096101 508 ntBASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13d-3J3QMG8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13d-3J3QMG8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Gm10033-202ENSMUST00000211874 928 ntBASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13d-3J3QMG8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Gm42642-201ENSMUST00000200683 355 ntBASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13d-3J3QMG8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13d-3J3QMG8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trav13d-3J3QMG8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Gm18284-201ENSMUST00000172604 624 ntBASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13d-3J3QMG8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13d-3J3QMG8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms