Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm3139J3QK78 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.64■□□□□ 0.57
Gm3139J3QK78 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.63■□□□□ 0.57
Gm3139J3QK78 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm3139J3QK78 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm3139J3QK78 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm3139J3QK78 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.61■□□□□ 0.57
Gm3139J3QK78 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.61■□□□□ 0.57
Gm3139J3QK78 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm3139J3QK78 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm3139J3QK78 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Gm26524-201ENSMUST00000192339 390 ntBASIC18.59■□□□□ 0.57
Gm3139J3QK78 Rab3c-203ENSMUST00000224180 967 ntBASIC18.59■□□□□ 0.57
Gm3139J3QK78 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.59■□□□□ 0.57
Gm3139J3QK78 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3139J3QK78 Notumos-201ENSMUST00000151998 2659 ntBASIC18.58■□□□□ 0.57
Gm3139J3QK78 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3139J3QK78 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Gm3139J3QK78 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3139J3QK78 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3139J3QK78 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3139J3QK78 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm3139J3QK78 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Gm3139J3QK78 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3139J3QK78 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.58■□□□□ 0.56
Gm3139J3QK78 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3139J3QK78 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.57■□□□□ 0.56
Gm3139J3QK78 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.57■□□□□ 0.56
Gm3139J3QK78 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3139J3QK78 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3139J3QK78 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms