Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.14■□□□□ 0.34
Trip12G5E870 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.14■□□□□ 0.34
Trip12G5E870 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trip12G5E870 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trip12G5E870 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.14■□□□□ 0.33
Trip12G5E870 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.14■□□□□ 0.33
Trip12G5E870 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trip12G5E870 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.13■□□□□ 0.33
Trip12G5E870 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.13■□□□□ 0.33
Trip12G5E870 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trip12G5E870 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.12■□□□□ 0.33
Trip12G5E870 Gm43799-201ENSMUST00000201845 579 ntBASIC17.12■□□□□ 0.33
Trip12G5E870 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Trip12G5E870 Iqck-206ENSMUST00000208658 2891 ntBASIC17.12■□□□□ 0.33
Trip12G5E870 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trip12G5E870 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trip12G5E870 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trip12G5E870 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trip12G5E870 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
Trip12G5E870 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trip12G5E870 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trip12G5E870 Gm9987-201ENSMUST00000069768 567 ntBASIC17.11■□□□□ 0.33
Trip12G5E870 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.11■□□□□ 0.33
Trip12G5E870 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trip12G5E870 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trip12G5E870 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trip12G5E870 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trip12G5E870 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.1■□□□□ 0.33
Trip12G5E870 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.1■□□□□ 0.33
Trip12G5E870 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trip12G5E870 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trip12G5E870 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trip12G5E870 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.09■□□□□ 0.33
Trip12G5E870 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.09■□□□□ 0.33
Trip12G5E870 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.09■□□□□ 0.33
Trip12G5E870 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.09■□□□□ 0.33
Trip12G5E870 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.09■□□□□ 0.33
Trip12G5E870 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trip12G5E870 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trip12G5E870 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trip12G5E870 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trip12G5E870 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trip12G5E870 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.08■□□□□ 0.33
Trip12G5E870 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.08■□□□□ 0.33
Trip12G5E870 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.08■□□□□ 0.33
Trip12G5E870 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Trip12G5E870 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.08■□□□□ 0.33
Trip12G5E870 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trip12G5E870 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trip12G5E870 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trip12G5E870 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trip12G5E870 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trip12G5E870 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Trip12G5E870 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.08■□□□□ 0.32
Trip12G5E870 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trip12G5E870 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trip12G5E870 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms