Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.14■□□□□ 0.33
TprF6ZDS4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.14■□□□□ 0.33
TprF6ZDS4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.14■□□□□ 0.33
TprF6ZDS4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.14■□□□□ 0.33
TprF6ZDS4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TprF6ZDS4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Gm44549-201ENSMUST00000208351 577 ntBASIC17.13■□□□□ 0.33
TprF6ZDS4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.13■□□□□ 0.33
TprF6ZDS4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.13■□□□□ 0.33
TprF6ZDS4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TprF6ZDS4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TprF6ZDS4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TprF6ZDS4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.12■□□□□ 0.33
TprF6ZDS4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TprF6ZDS4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Gm10698-201ENSMUST00000182663 604 ntBASIC17.12■□□□□ 0.33
TprF6ZDS4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TprF6ZDS4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TprF6ZDS4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.11■□□□□ 0.33
TprF6ZDS4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TprF6ZDS4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.11■□□□□ 0.33
TprF6ZDS4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.11■□□□□ 0.33
TprF6ZDS4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TprF6ZDS4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TprF6ZDS4 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.11■□□□□ 0.33
TprF6ZDS4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.1■□□□□ 0.33
TprF6ZDS4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.1■□□□□ 0.33
TprF6ZDS4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.1■□□□□ 0.33
TprF6ZDS4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TprF6ZDS4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TprF6ZDS4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Gm2399-201ENSMUST00000104944 225 ntBASIC17.09■□□□□ 0.33
TprF6ZDS4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TprF6ZDS4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TprF6ZDS4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.09■□□□□ 0.33
TprF6ZDS4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
TprF6ZDS4 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.09■□□□□ 0.33
TprF6ZDS4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TprF6ZDS4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TprF6ZDS4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TprF6ZDS4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TprF6ZDS4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms