Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a3E9PWQ3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a3E9PWQ3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Gm29518-201ENSMUST00000190858 372 ntBASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.9■□□□□ 0.62
Col6a3E9PWQ3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.89■□□□□ 0.62
Col6a3E9PWQ3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.89■□□□□ 0.62
Col6a3E9PWQ3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a3E9PWQ3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a3E9PWQ3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a3E9PWQ3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a3E9PWQ3 Gm18733-201ENSMUST00000173950 856 ntBASIC18.85■□□□□ 0.61
Col6a3E9PWQ3 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.85■□□□□ 0.61
Col6a3E9PWQ3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a3E9PWQ3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms