Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx8D3YU81 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Rfx8D3YU81 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx8D3YU81 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Gm26571-201ENSMUST00000181399 666 ntBASIC19.73■□□□□ 0.75
Rfx8D3YU81 Gm7514-201ENSMUST00000209475 934 ntBASIC19.73■□□□□ 0.75
Rfx8D3YU81 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.73■□□□□ 0.75
Rfx8D3YU81 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.73■□□□□ 0.75
Rfx8D3YU81 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Rfx8D3YU81 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfx8D3YU81 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx8D3YU81 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx8D3YU81 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.7■□□□□ 0.74
Rfx8D3YU81 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.7■□□□□ 0.74
Rfx8D3YU81 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx8D3YU81 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.69■□□□□ 0.74
Rfx8D3YU81 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx8D3YU81 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.69■□□□□ 0.74
Rfx8D3YU81 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx8D3YU81 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rfx8D3YU81 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms