Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Gm5921-201ENSMUST00000075898 882 ntBASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12887B1AVM1 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12887B1AVM1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12887B1AVM1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.12■□□□□ 0.01
Gm12887B1AVM1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12887B1AVM1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm12887B1AVM1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12887B1AVM1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Gm12887B1AVM1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Gm12887B1AVM1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm12887B1AVM1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Gm12887B1AVM1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms