Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pramef20B1ARV6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pramef20B1ARV6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pramef20B1ARV6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pramef20B1ARV6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pramef20B1ARV6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pramef20B1ARV6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pramef20B1ARV6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pramef20B1ARV6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pramef20B1ARV6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 AA386476-201ENSMUST00000098781 1665 ntBASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pramef20B1ARV6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pramef20B1ARV6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms