Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chd3B1AR17 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Chd3B1AR17 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Chd3B1AR17 Gm5643-201ENSMUST00000117081 966 ntBASIC18.35■□□□□ 0.53
Chd3B1AR17 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.35■□□□□ 0.53
Chd3B1AR17 Trmt13-210ENSMUST00000198454 880 ntBASIC18.35■□□□□ 0.53
Chd3B1AR17 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.35■□□□□ 0.53
Chd3B1AR17 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chd3B1AR17 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chd3B1AR17 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chd3B1AR17 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd3B1AR17 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chd3B1AR17 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Chd3B1AR17 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd3B1AR17 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chd3B1AR17 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chd3B1AR17 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Chd3B1AR17 Gm13168-201ENSMUST00000121771 632 ntBASIC18.33■□□□□ 0.52
Chd3B1AR17 Gm20760-201ENSMUST00000179197 648 ntBASIC18.33■□□□□ 0.52
Chd3B1AR17 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.33■□□□□ 0.52
Chd3B1AR17 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Chd3B1AR17 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chd3B1AR17 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.32■□□□□ 0.52
Chd3B1AR17 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd3B1AR17 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd3B1AR17 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chd3B1AR17 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd3B1AR17 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chd3B1AR17 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
Chd3B1AR17 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chd3B1AR17 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chd3B1AR17 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Chd3B1AR17 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chd3B1AR17 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd3B1AR17 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.3■□□□□ 0.52
Chd3B1AR17 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd3B1AR17 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd3B1AR17 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.29■□□□□ 0.52
Chd3B1AR17 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chd3B1AR17 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chd3B1AR17 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd3B1AR17 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd3B1AR17 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.29■□□□□ 0.52
Chd3B1AR17 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd3B1AR17 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd3B1AR17 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd3B1AR17 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd3B1AR17 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms