Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herc3A6H6S0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Gm10493-201ENSMUST00000097270 612 ntBASIC20.66■□□□□ 0.9
Herc3A6H6S0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.66■□□□□ 0.9
Herc3A6H6S0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.66■□□□□ 0.9
Herc3A6H6S0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herc3A6H6S0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Herc3A6H6S0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Herc3A6H6S0 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.64■□□□□ 0.89
Herc3A6H6S0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herc3A6H6S0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herc3A6H6S0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.64■□□□□ 0.89
Herc3A6H6S0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herc3A6H6S0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herc3A6H6S0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Herc3A6H6S0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herc3A6H6S0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Herc3A6H6S0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.6■□□□□ 0.89
Herc3A6H6S0 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.6■□□□□ 0.89
Herc3A6H6S0 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.6■□□□□ 0.89
Herc3A6H6S0 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.6■□□□□ 0.89
Herc3A6H6S0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.6■□□□□ 0.89
Herc3A6H6S0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Herc3A6H6S0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.59■□□□□ 0.89
Herc3A6H6S0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.59■□□□□ 0.89
Herc3A6H6S0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Herc3A6H6S0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herc3A6H6S0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Herc3A6H6S0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Herc3A6H6S0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.58■□□□□ 0.89
Herc3A6H6S0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Herc3A6H6S0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Herc3A6H6S0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms