Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm6623-201ENSMUST00000173570 544 ntBASIC14.21□□□□□ -0.14
Col6a5A6H584 AW822252-206ENSMUST00000208904 237 ntBASIC14.21□□□□□ -0.14
Col6a5A6H584 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a5A6H584 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Col6a5A6H584 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col6a5A6H584 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a5A6H584 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.2□□□□□ -0.14
Col6a5A6H584 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.2□□□□□ -0.14
Col6a5A6H584 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.2□□□□□ -0.14
Col6a5A6H584 Gm5587-201ENSMUST00000206270 674 ntBASIC14.2□□□□□ -0.14
Col6a5A6H584 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.2□□□□□ -0.14
Col6a5A6H584 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a5A6H584 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.19□□□□□ -0.14
Col6a5A6H584 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a5A6H584 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Col6a5A6H584 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.18□□□□□ -0.14
Col6a5A6H584 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col6a5A6H584 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a5A6H584 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Gm37935-201ENSMUST00000192012 982 ntBASIC14.17□□□□□ -0.14
Col6a5A6H584 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.17□□□□□ -0.14
Col6a5A6H584 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col6a5A6H584 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.17□□□□□ -0.14
Col6a5A6H584 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a5A6H584 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a5A6H584 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Col6a5A6H584 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gm18115-201ENSMUST00000221209 621 ntBASIC14.15□□□□□ -0.14
Col6a5A6H584 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.15□□□□□ -0.14
Col6a5A6H584 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col6a5A6H584 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms