Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.02■□□□□ -0
Trav12d-1A0N8R0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav12d-1A0N8R0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav12d-1A0N8R0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav12d-1A0N8R0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Gm45606-201ENSMUST00000209836 2795 ntBASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Gm7860-201ENSMUST00000121190 879 ntBASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav12d-1A0N8R0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12d-1A0N8R0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12d-1A0N8R0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12d-1A0N8R0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms