Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm3854A0A1B0GSS6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm3854A0A1B0GSS6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm715-201ENSMUST00000117865 831 ntBASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm3854A0A1B0GSS6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm15378-201ENSMUST00000121894 207 ntBASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm3854A0A1B0GSS6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm3854A0A1B0GSS6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm3854A0A1B0GSS6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm7977-201ENSMUST00000193787 748 ntBASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm3854A0A1B0GSS6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms