Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc194A0A140LIT1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc194A0A140LIT1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc194A0A140LIT1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.58■□□□□ 0.56
Ccdc194A0A140LIT1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc194A0A140LIT1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ccdc194A0A140LIT1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.58■□□□□ 0.56
Ccdc194A0A140LIT1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Gm26833-201ENSMUST00000180899 440 ntBASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc194A0A140LIT1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc194A0A140LIT1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Gm6139-201ENSMUST00000079261 882 ntBASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc194A0A140LIT1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc194A0A140LIT1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Gm45417-201ENSMUST00000209533 758 ntBASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Gm40848-201ENSMUST00000221998 324 ntBASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc194A0A140LIT1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms