Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26833-201ENSMUST00000180899 440 ntBASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm40848-201ENSMUST00000221998 324 ntBASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Trav15d-2-dv6d-2A0A0G2JGQ7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.33■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms