Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Gm10033-202ENSMUST00000211874 928 ntBASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav23A0A0G2JG17 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav23A0A0G2JG17 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 AV356131-201ENSMUST00000206201 750 ntBASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav23A0A0G2JG17 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav23A0A0G2JG17 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav23A0A0G2JG17 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Gm7860-201ENSMUST00000121190 879 ntBASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav23A0A0G2JG17 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav23A0A0G2JG17 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav23A0A0G2JG17 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav23A0A0G2JG17 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Gm10849-201ENSMUST00000100397 618 ntBASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav23A0A0G2JG17 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms