Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-4A0A0G2JG01 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-4A0A0G2JG01 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-4A0A0G2JG01 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav13n-4A0A0G2JG01 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav13n-4A0A0G2JG01 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav13n-4A0A0G2JG01 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.08■□□□□ 0
Trav13n-4A0A0G2JG01 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-4A0A0G2JG01 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-4A0A0G2JG01 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms