Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Rarb-207ENSMUST00000225921 2756 ntBASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav19A0A0B4J1K4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.96□□□□□ -0.18
Trav19A0A0B4J1K4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav19A0A0B4J1K4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav19A0A0B4J1K4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav19A0A0B4J1K4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav19A0A0B4J1K4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Gm9959-201ENSMUST00000068277 390 ntBASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav19A0A0B4J1K4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav19A0A0B4J1K4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav19A0A0B4J1K4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav19A0A0B4J1K4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav19A0A0B4J1K4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms