Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav4-3A0A0B4J1K1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav4-3A0A0B4J1K1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm8969-201ENSMUST00000199694 526 ntBASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fst-202ENSMUST00000223640 2612 ntBASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav4-3A0A0B4J1K1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav4-3A0A0B4J1K1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.72□□□□□ -0.37
Trav4-3A0A0B4J1K1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms