Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv19A0A0B4J1H4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv19A0A0B4J1H4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv19A0A0B4J1H4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv19A0A0B4J1H4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trbv19A0A0B4J1H4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trbv19A0A0B4J1H4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Trbv19A0A0B4J1H4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbv19A0A0B4J1H4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbv19A0A0B4J1H4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trbv19A0A0B4J1H4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms