Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trbv13-3A0A0B4J1H2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm9870-201ENSMUST00000063874 645 ntBASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Cap2-205ENSMUST00000225824 1634 ntBASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Serp2-204ENSMUST00000228055 705 ntBASIC14.53□□□□□ -0.08
Trbv13-3A0A0B4J1H2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms