Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trbv5A0A0B4J1G9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trbv5A0A0B4J1G9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbv5A0A0B4J1G9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.02■□□□□ -0
Trbv5A0A0B4J1G9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv5A0A0B4J1G9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv5A0A0B4J1G9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv5A0A0B4J1G9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trbv5A0A0B4J1G9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.02□□□□□ -0.01
Trbv5A0A0B4J1G9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Etf1-202ENSMUST00000180351 108 ntBASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Cap2-205ENSMUST00000225824 1634 ntBASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trbv5A0A0B4J1G9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Gm43213-201ENSMUST00000151866 1790 ntBASIC15□□□□□ -0.01
Trbv5A0A0B4J1G9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms