Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-42A0A0A6YY38 Golph3-202ENSMUST00000226517 2359 ntBASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-42A0A0A6YY38 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm5643-201ENSMUST00000117081 966 ntBASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Gm10252-201ENSMUST00000209541 832 ntBASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-42A0A0A6YY38 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-42A0A0A6YY38 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-42A0A0A6YY38 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Gm11249-201ENSMUST00000117071 859 ntBASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-42A0A0A6YY38 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-42A0A0A6YY38 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Gm2399-201ENSMUST00000104944 225 ntBASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Gm18666-201ENSMUST00000190039 958 ntBASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-42A0A0A6YY38 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms