Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm6420-201ENSMUST00000193885 723 ntBASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv1-52A0A0A6YXC3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm7291-201ENSMUST00000199147 382 ntBASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.18□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Nespas-201ENSMUST00000143738 1083 ntBASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms