Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv23A0A0A6YWQ1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv23A0A0A6YWQ1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv23A0A0A6YWQ1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv23A0A0A6YWQ1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv23A0A0A6YWQ1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv23A0A0A6YWQ1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv23A0A0A6YWQ1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv23A0A0A6YWQ1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms